STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DE36Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (329 aa)    
Predicted Functional Partners:
A0A1Y2DGV7
Uncharacterized protein.
    
 0.983
A0A1Y2DYX9
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.874
A0A1Y2DV95
Putative snare protein; Belongs to the synaptobrevin family.
    
 
 0.816
A0A1Y2ELX5
Ras-like protein Rab7.
    
 0.806
A0A1Y2DYA8
Ras-GTPase.
    
 0.805
A0A1Y2DVA3
Ras family-domain-containing protein.
    
 0.781
A0A1Y2DVQ4
ATP synthase regulation protein NCA2-domain-containing protein.
    
 0.781
A0A1Y2EF06
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.761
A0A1Y2E7T7
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.759
A0A1Y2DXR9
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.742
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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