STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DI54Sialidase. (300 aa)    
Predicted Functional Partners:
A0A1Y2DVB6
Bystin.
   
 0.944
A0A1Y2EIP7
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.927
A0A1Y2DYT9
Putative pre-rRNA processing protein Tsr1.
   
 0.926
A0A1Y2E1E0
RIO1 family protein.
   
 0.919
A0A1Y2EK34
Low temperature viability protein.
   
 0.918
A0A1Y2EB47
U3 small nucleolar ribonucleo protein IMP3.
   
 0.894
A0A1Y2E850
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
  0.879
A0A1Y2EA20
Ribosomal protein S11-domain-containing protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.869
A0A1Y2DVU6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.862
A0A1Y2DTJ5
Apoptosis-antagonizing transcription factor.
   
 
 0.860
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.