STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DKB8Nup133 N terminal like-domain-containing protein. (1375 aa)    
Predicted Functional Partners:
A0A1Y2DPP8
Nuclear pore complex, component sec13; Belongs to the WD repeat SEC13 family.
    
 0.999
A0A1Y2DTB4
Nuclear protein 96-domain-containing protein.
   
 0.999
A0A1Y2E055
WD domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A1Y2E4P3
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
  
 0.999
A0A1Y2DSL9
Uncharacterized protein.
  
 0.993
A0A1Y2DIZ3
Nucleoporin Nup186/Nup192/Nup205.
  
 0.992
A0A1Y2DGF3
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.990
A0A1Y2DXX7
Nup93/Nic96-domain-containing protein.
   
 0.989
A0A1Y2E8P3
Nucleoporin complex subunit 54-domain-containing protein.
   
 0.989
A0A1Y2DLV3
Nucleoporin Nup120/160-domain-containing protein.
   
 0.988
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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