STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DKC9XAP5, circadian clock regulator-domain-containing protein. (357 aa)    
Predicted Functional Partners:
A0A1Y2E813
Pre-mRNA splicing Prp18-interacting factor-domain-containing protein.
   
 
  0.941
A0A1Y2EF27
WD40-repeat-containing domain protein.
   
 
  0.932
A0A1Y2DJU9
RING-type domain-containing protein.
 
      0.832
A0A1Y2DLG2
Smg-4/UPF3 family-domain-containing protein.
   
  0.767
A0A1Y2EK97
Uncharacterized protein.
    
  0.746
A0A1Y2DXI9
Uncharacterized protein.
   
 
  0.715
A0A1Y2E436
RRM domain-containing protein.
   
  0.715
A0A1Y2DA32
Mlo3-like protein.
   
  0.706
A0A1Y2EET9
Armadillo-type protein.
    
  0.704
A0A1Y2EM77
Complex proteins associated with Set1p component shg1-domain-containing protein.
    
  0.672
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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