STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DLN9Uncharacterized protein. (796 aa)    
Predicted Functional Partners:
A0A1Y2EJJ8
Spindle pole body component.
    
  0.780
A0A1Y2DMU2
Carboxyl transferase.
   
 0.763
A0A1Y2DV57
Spindle pole body component.
    
 0.707
A0A1Y2DDA7
Spindle pole body component.
    
 0.684
A0A1Y2E018
Spc98 family-domain-containing protein.
    
 0.684
A0A1Y2D5I5
Uncharacterized protein.
  
 
 0.674
A0A1Y2EBU3
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.655
A0A1Y2DVC0
Spindle pole body component.
    
 0.630
A0A1Y2E360
Uncharacterized protein.
  
 
   0.561
A0A1Y2EBZ3
Microtubule associated protein.
    
 0.556
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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