STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DNR6Putative ER to golgi transport protein. (1034 aa)    
Predicted Functional Partners:
A0A1Y2EJ88
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
A0A1Y2DPP8
Nuclear pore complex, component sec13; Belongs to the WD repeat SEC13 family.
   
 0.992
A0A1Y2DNL8
Uncharacterized protein.
   
0.984
A0A1Y2EI94
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.976
A0A1Y2DYW2
WD domain-containing protein.
   
 0.957
A0A1Y2EJE5
Uncharacterized protein.
   
 0.956
A0A1Y2DN25
t-SNARE.
    
 0.859
A0A1Y2EGB6
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.857
A0A1Y2E358
GRASP55/65 PDZ-like domain-domain-containing protein.
   
 0.844
A0A1Y2EFC0
Uncharacterized protein.
   
 0.827
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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