STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DPA7GATA-type domain-containing protein. (200 aa)    
Predicted Functional Partners:
A0A1Y2DUI4
Uncharacterized protein.
    
 0.673
A0A1Y2DGZ9
LIM-domain binding protein-domain-containing protein.
    
 0.664
A0A1Y2E6V6
MADS-box domain-containing protein.
    
 0.643
A0A1Y2DCK6
Histone H2A; Belongs to the histone H2A family.
    
 0.636
A0A1Y2DPQ5
Uncharacterized protein; Belongs to the peptidase C19 family.
    
  0.614
A0A1Y2E0G0
Histone-fold-containing protein.
    
 
 0.595
A0A1Y2DVK2
Putative RNA polymerase I and III transcription factor complex component Tbp.
    
 0.582
A0A1Y2EI54
TATA-box binding protein.
    
 0.582
A0A1Y2E357
Histone-fold-containing protein.
    
 
 0.580
A0A1Y2EI06
Nitrogen metabolic regulation protein.
    
 
 0.579
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.