STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DR015-formyltetrahydrofolate cyclo-ligase. (256 aa)    
Predicted Functional Partners:
A0A1Y2EDC0
C-1-tetrahydrofolate synthase.
   
 0.887
A0A1Y2DUV3
Uncharacterized protein.
     
 0.877
A0A1Y2DSI5
Methylenetetrahydrofolate dehydrogenase.
    
 0.855
A0A1Y2EA53
Pre-rRNA processing nucleolar protein-like protein Sik1.
   
    0.854
A0A1Y2DUQ0
Formyl transferase.
   
 
 0.845
A0A1Y2EBQ9
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.831
A0A1Y2EBX2
Uncharacterized protein.
    
 0.819
A0A1Y2E1D5
Putative small nucleolar ribonucleo protein complex subunit Utp15.
   
    0.813
A0A1Y2DW88
Formyl_trans_N domain-containing protein.
    
 0.786
A0A1Y2E598
Phosphoribosylglycinamide formyltransferase.
    
 0.786
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.