STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DR11Uncharacterized protein. (750 aa)    
Predicted Functional Partners:
A0A1Y2E9Z0
60S ribosomal protein l7-like protein.
  
 
 0.873
A0A1Y2E666
Ribosomal L29 protein-domain-containing protein.
  
 
 0.862
A0A1Y2EB99
60S ribosomal protein L5.
  
 
 0.862
A0A1Y2DYS0
Ribosomal protein L24.
  
   0.851
A0A1Y2DW79
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.844
A0A1Y2DWD6
60S ribosomal protein L25.
  
 
 0.816
A0A1Y2E337
Ribosomal protein S19-domain-containing protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.806
A0A1Y2EJP7
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.769
A0A1Y2DEX9
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
   0.757
A0A1Y2EAQ6
Mitochondrial 54S ribosomal protein YmL38/YmL34; Belongs to the universal ribosomal protein uL14 family.
  
   0.757
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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