STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DSB5Endoribonuclease L-PSP/chorismate mutase-like protein. (175 aa)    
Predicted Functional Partners:
A0A1Y2DUQ8
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.664
A0A1Y2EJH4
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.642
A0A1Y2DFF4
Threonine dehydratase.
  
 0.597
A0A1Y2DXS5
ACT domain-containing protein.
    
  0.597
A0A1Y2E8D1
Diaminopropionate ammonia-lyase family protein.
  
 0.597
A0A1Y2EBQ8
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.585
A0A1Y2DWD3
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.584
A0A1Y2D869
Phosphoribosyltransferase-like protein.
 
 
 0.530
A0A1Y2DPW9
Cell differentiation protein rcd1.
    
 
 0.502
A0A1Y2DQ88
Uncharacterized protein.
    
 
 0.501
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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