STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DU35Uncharacterized protein. (582 aa)    
Predicted Functional Partners:
A0A1Y2E4H9
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.888
A0A1Y2DMU4
DNA repair endonuclease XPF.
    
 0.868
A0A1Y2DQI2
Restriction endonuclease type II-like protein.
   
 0.860
A0A1Y2DLZ4
NPL4 family protein.
    
 0.854
A0A1Y2E382
Uncharacterized protein.
    
 0.842
A0A1Y2DVW2
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.807
A0A1Y2E9K2
Uncharacterized protein.
   
 0.807
A0A1Y2DDU6
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.803
A0A1Y2E346
ERCC4 domain-containing protein.
    
 0.775
A0A1Y2EKT6
50S ribosomal protein L1.
   
 0.766
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.