STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DUZ0SWIRM domain-domain-containing protein. (695 aa)    
Predicted Functional Partners:
A0A1Y2DIM0
Uncharacterized protein.
   
 0.999
A0A1Y2DXF3
SWIB domain-containing protein.
    
 0.998
A0A1Y2DWA9
SNF2-family ATP dependent chromatin remodeling factor like protein.
   
 0.995
A0A1Y2D692
Actin family; Belongs to the actin family.
    
 0.988
A0A1Y2D5J0
Bromodomain-containing protein.
   
 0.983
A0A1Y2DNB8
Uncharacterized protein.
   
 0.983
A0A1Y2DTB8
Uncharacterized protein.
   
 0.982
A0A1Y2DXY0
Actin-related protein RO7; Belongs to the actin family.
    
 0.979
A0A1Y2DVI7
Uncharacterized protein; Belongs to the actin family.
    
 0.964
A0A1Y2E0I6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.958
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.