STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DVB7Reticulon-like protein. (320 aa)    
Predicted Functional Partners:
A0A1Y2DB75
Vta1 like-domain-containing protein.
    
   0.880
A0A1Y2EIW4
GTP cyclohydrolase 1.
    
   0.880
A0A1Y2DDS2
Uncharacterized protein.
   
  
 0.877
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.762
A0A1Y2EL24
Protein YOP1.
    
 
 0.762
A0A1Y2EDU3
Protein PFS2.
    
  0.696
A0A1Y2DZY1
Uncharacterized protein.
   
 
 0.682
A0A1Y2DNG5
Zinc_ribbon_10 domain-containing protein.
    
 
 0.654
A0A1Y2DHD8
Kinase-like domain-containing protein.
    
 
 0.652
A0A1Y2DP24
Protein kinase domain-containing protein.
    
 
 0.652
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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