STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DXZ7Uncharacterized protein. (591 aa)    
Predicted Functional Partners:
A0A1Y2E7J9
Uncharacterized protein.
   
 0.775
A0A1Y2EG45
Skp1 family, dimerization domain-domain-containing protein; Belongs to the SKP1 family.
   
 0.775
A0A1Y2ED28
E3 ubiquitin-protein ligase RBX1.
    
 0.759
A0A1Y2DM60
Cullin; Belongs to the cullin family.
    
 0.749
A0A1Y2DVD7
Cullin family protein; Belongs to the cullin family.
    
 0.749
A0A1Y2E3V5
Ubiquitin-like protein NEDD8.
    
 0.670
A0A1Y2DUT0
Uncharacterized protein.
  
 
 0.661
A0A1Y2DC83
Skp1 family protein; Belongs to the SKP1 family.
    
 0.633
A0A1Y2EIY1
Armadillo-type protein.
    
 0.592
A0A1Y2DTL3
Uncharacterized protein.
    
 0.556
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.