STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DYH9Voltage-dependent anion channel. (164 aa)    
Predicted Functional Partners:
A0A1Y2EBJ6
WD40-repeat-containing domain protein.
    
 0.579
A0A1Y2E2E4
B30.2/SPRY domain-containing protein.
    
 0.575
A0A1Y2E4P3
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.554
A0A1Y2DKB8
Nup133 N terminal like-domain-containing protein.
    
  0.550
A0A1Y2DPP8
Nuclear pore complex, component sec13; Belongs to the WD repeat SEC13 family.
    
 0.536
A0A1Y2E055
WD domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.513
A0A1Y2EHQ6
UBA domain-containing protein.
    
  0.505
A0A1Y2DGF3
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
    
  0.499
A0A1Y2EBK2
Uncharacterized protein.
    
  0.499
A0A1Y2DXX7
Nup93/Nic96-domain-containing protein.
    
  0.493
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.