STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2E0G6Pectin lyase fold/virulence factor; Belongs to the glycosyl hydrolase 28 family. (445 aa)    
Predicted Functional Partners:
A0A1Y2E7U5
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.979
A0A1Y2DRD3
Zinc-finger of the MIZ type in Nse subunit-domain-containing protein.
    
 0.975
A0A1Y2E892
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.975
A0A1Y2E0H1
Nse1 non-SMC component of SMC5-6 complex-domain-containing protein.
    
 0.945
A0A1Y2EDZ3
Structural maintenance of chromosomes protein.
    
 0.823
A0A1Y2EE30
Uncharacterized protein.
   
 0.809
A0A1Y2E9X3
Glycosyl hydrolases family 28-domain-containing protein.
  
  
 
0.806
A0A1Y2EHT8
Oxidoreductase family protein.
   
 
  0.787
A0A1Y2DVV3
Structural maintenance of chromosomes protein.
    
 0.783
A0A1Y2EBA8
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.693
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.