STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2E2V5RED_N domain-containing protein. (528 aa)    
Predicted Functional Partners:
A0A1Y2E229
PRP1 splicing factor.
   
 0.970
A0A1Y2EK79
Splicing factor, Prp19-binding domain-domain-containing protein.
   
  0.964
A0A1Y2E795
PRP38 family-domain-containing protein.
   
 0.929
A0A1Y2DR77
zf-U1 domain-containing protein.
   
  0.880
A0A1Y2E361
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
  0.849
A0A1Y2DVW6
CPSF A subunit region-domain-containing protein.
    
   0.835
A0A1Y2DD13
P-loop containing nucleoside triphosphate hydrolase protein.
    
   0.818
A0A1Y2DD25
Elongation factor G, III-V domain-containing protein.
    
   0.818
A0A1Y2D6Q9
WD repeat-containing protein.
    
 
 0.816
A0A1Y2E0L3
Thermotolerance protein.
    
   0.800
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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