STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2E3A3Aminotransferase class-V. (405 aa)    
Predicted Functional Partners:
A0A1Y2DAS1
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.986
A0A1Y2DCG6
Frataxin.
    
 0.844
A0A1Y2DYU8
Uncharacterized protein.
  
 0.840
A0A1Y2E0P3
NifU-like protein.
  
 0.840
A0A1Y2E1X9
Haloacid dehalogenase-like hydrolase.
    
 0.826
A0A1Y2EAR6
2-haloalkanoic acid dehalogenase.
    
 0.826
A0A1Y2EAI4
Metallo-beta-lactamase family protein.
  
 0.821
A0A1Y2EIU6
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.821
A0A1Y2D950
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.786
A0A1Y2DK02
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.786
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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