STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2E768Malate synthase; Belongs to the malate synthase family. (542 aa)    
Predicted Functional Partners:
A0A1Y2E0E5
Isocitrate lyase.
 
 
 0.998
A0A1Y2E937
Isocitrate lyase.
 
 
 0.995
A0A1Y2DTT0
Phosphoenolpyruvate carboxykinase-domain-containing protein.
   
 
 0.928
A0A1Y2DYM3
Alanine-glyoxylate aminotransferase.
  
 
 0.915
A0A1Y2DXN1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.909
A0A1Y2E6F8
Citrate synthase; Belongs to the citrate synthase family.
   
 0.909
A0A1Y2E8C7
Citrate synthase; Belongs to the citrate synthase family.
   
 0.909
A0A1Y2D7S1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.908
A0A1Y2DSE7
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.908
A0A1Y2E6U1
Fumarate hydratase.
    
 0.902
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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