STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EA96Beta-eliminating lyase. (452 aa)    
Predicted Functional Partners:
A0A1Y2EAA8
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.792
A0A1Y2DYM3
Alanine-glyoxylate aminotransferase.
    
 0.789
A0A1Y2DA49
Threonine synthase.
  
 0.782
A0A1Y2DAX6
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.757
A0A1Y2DHX4
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.757
A0A1Y2D8Q8
Phosphoserine phosphatase serb.
    
 0.754
A0A1Y2DFF4
Threonine dehydratase.
   
 
 0.744
A0A1Y2EHA7
Putative aminotransferase.
   
 
 0.724
A0A1Y2EJH4
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
   
 
 0.704
A0A1Y2DPZ5
Alanine transaminase-like protein.
  
 
 0.699
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.