STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EDL2Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
A0A1Y2E484
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.824
A0A1Y2D8S3
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.717
A0A1Y2D831
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.651
A0A1Y2E3Q8
Glutathione S-transferase; Belongs to the GST superfamily.
    
  0.609
A0A1Y2EHR0
AhpC/TSA family protein.
   
 0.597
A0A1Y2DBS8
DNA-directed RNA polymerase.
   
 
 0.594
A0A1Y2DDY8
RNA polymerase Rpb3/RpoA insert domain-containing protein.
   
 
 0.594
A0A1Y2DWL7
tRNA synthetases class I (M)-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.588
A0A1Y2E4R8
tRNA synthetases class I-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.549
A0A1Y2EJU0
Uncharacterized protein.
    
 0.545
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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