STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EFI2Dihydrodipicolinate synthetase; Belongs to the DapA family. (338 aa)    
Predicted Functional Partners:
A0A1Y2DHI2
Tryptophan synthase.
    
  0.794
A0A1Y2DYM3
Alanine-glyoxylate aminotransferase.
   
 
 0.765
A0A1Y2DH17
Aspartate aminotransferase.
   
 0.759
A0A1Y2DKU2
Aspartate aminotransferase.
   
  0.759
A0A1Y2DD62
FAD dependent oxidoreductase-like protein.
   
 
  0.752
A0A1Y2DUS2
D-amino-acid oxidase.
   
 
  0.752
A0A1Y2E768
Malate synthase; Belongs to the malate synthase family.
   
 
 0.742
A0A1Y2DTT9
Uncharacterized protein.
  
  
 
0.741
A0A1Y2E0E5
Isocitrate lyase.
   
 
  0.741
A0A1Y2E937
Isocitrate lyase.
   
 
  0.741
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.