STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yutEUnannotated protein. (143 aa)    
Predicted Functional Partners:
GCA_000308095_00635
Unannotated protein.
 
     0.930
nagD
Unannotated protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
     
 0.881
ghrB_2
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.871
GCA_000308095_02022
Unannotated protein.
  
     0.764
sdhC
Unannotated protein.
  
     0.747
yfhH
Unannotated protein.
  
     0.740
acuA
Unannotated protein.
  
     0.740
GCA_000308095_02663
Unannotated protein.
  
     0.739
GCA_000308095_01659
Unannotated protein.
  
     0.736
cvfC
Unannotated protein.
  
     0.727
Your Current Organism:
Staphylococcus intermedius
NCBI taxonomy Id: 1141106
Other names: S. intermedius NCTC 11048, Staphylococcus intermedius ATCC 29663, Staphylococcus intermedius CCM 5739, Staphylococcus intermedius CCUG 2560, Staphylococcus intermedius CIP 81.60, Staphylococcus intermedius DSM 20373, Staphylococcus intermedius GTC 266, Staphylococcus intermedius JCM 2422, Staphylococcus intermedius MAFF 911388, Staphylococcus intermedius NCTC 11048, Staphylococcus intermedius str. NCTC 11048, Staphylococcus intermedius strain NCTC 11048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.