STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000308095_01834Unannotated protein. (147 aa)    
Predicted Functional Partners:
GCA_000308095_00949
Unannotated protein.
  
 
 0.753
galK
Unannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.740
arnB
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.675
npdA
Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
    
  0.598
mnaA
Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.536
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.466
nadD
Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
 
  0.427
asd
Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
 
  0.412
Your Current Organism:
Staphylococcus intermedius
NCBI taxonomy Id: 1141106
Other names: S. intermedius NCTC 11048, Staphylococcus intermedius ATCC 29663, Staphylococcus intermedius CCM 5739, Staphylococcus intermedius CCUG 2560, Staphylococcus intermedius CIP 81.60, Staphylococcus intermedius DSM 20373, Staphylococcus intermedius GTC 266, Staphylococcus intermedius JCM 2422, Staphylococcus intermedius MAFF 911388, Staphylococcus intermedius NCTC 11048, Staphylococcus intermedius str. NCTC 11048, Staphylococcus intermedius strain NCTC 11048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.