STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA1_2Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (288 aa)    
Predicted Functional Partners:
ecfT
Unannotated protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
ecfA1_1
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
0.996
ykoC
Unannotated protein.
  
 0.989
bioY
Unannotated protein.
 
 
 0.979
truA
Unannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.934
metN_2
Unannotated protein.
 
0.862
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
 
  
 0.831
gsiA_2
Unannotated protein.
 
    
0.820
gsiA_1
Unannotated protein.
 
0.809
rplM
Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
  
 0.773
Your Current Organism:
Staphylococcus intermedius
NCBI taxonomy Id: 1141106
Other names: S. intermedius NCTC 11048, Staphylococcus intermedius ATCC 29663, Staphylococcus intermedius CCM 5739, Staphylococcus intermedius CCUG 2560, Staphylococcus intermedius CIP 81.60, Staphylococcus intermedius DSM 20373, Staphylococcus intermedius GTC 266, Staphylococcus intermedius JCM 2422, Staphylococcus intermedius MAFF 911388, Staphylococcus intermedius NCTC 11048, Staphylococcus intermedius str. NCTC 11048, Staphylococcus intermedius strain NCTC 11048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.