STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrA_2Unannotated protein. (549 aa)    
Predicted Functional Partners:
htrA_1
Unannotated protein.
  
  
 
0.896
ktrB_2
Unannotated protein.
       0.810
glpK
Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.807
secDF
Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.801
yoaE
Unannotated protein.
       0.740
GCA_000308095_01572
Unannotated protein.
    
 
 0.673
rplK
Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.664
rpsF
Unannotated protein; Binds together with S18 to 16S ribosomal RNA.
   
   0.621
rplI
Unannotated protein; Binds to the 23S rRNA.
 
 
   0.601
rplY
Unannotated protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
   0.596
Your Current Organism:
Staphylococcus intermedius
NCBI taxonomy Id: 1141106
Other names: S. intermedius NCTC 11048, Staphylococcus intermedius ATCC 29663, Staphylococcus intermedius CCM 5739, Staphylococcus intermedius CCUG 2560, Staphylococcus intermedius CIP 81.60, Staphylococcus intermedius DSM 20373, Staphylococcus intermedius GTC 266, Staphylococcus intermedius JCM 2422, Staphylococcus intermedius MAFF 911388, Staphylococcus intermedius NCTC 11048, Staphylococcus intermedius str. NCTC 11048, Staphylococcus intermedius strain NCTC 11048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.