STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL47820.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
SDL47791.1
Na+/proline symporter.
  
    0.814
SDL47759.1
Response regulator receiver domain-containing protein.
       0.777
SDL47842.1
Hypothetical protein.
       0.561
SDL47717.1
propionyl-CoA synthetase.
       0.541
SDL47870.1
Predicted arabinose efflux permease, MFS family.
       0.446
SDL47893.1
Hypothetical protein.
       0.418
Your Current Organism:
Chryseobacterium taihuense
NCBI taxonomy Id: 1141221
Other names: C. taihuense, CGMCC 1.10941, Chryseobacterium sp. THMBM1, Chryseobacterium taihuense Wu et al. 2013, NBRC 108747, strain THMBM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.