STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL99782.1Electron transfer flavoprotein alpha subunit apoprotein. (315 aa)    
Predicted Functional Partners:
SDL99757.1
Electron transfer flavoprotein beta subunit.
 0.999
SDM09966.1
Acyl-CoA dehydrogenase.
 0.983
SDL58607.1
Acyl-CoA dehydrogenase.
 0.982
SDL90352.1
glutaryl-CoA dehydrogenase.
 0.963
SDL88901.1
Acyl-CoA dehydrogenase.
 0.962
SDL84393.1
glutaryl-CoA dehydrogenase.
 0.908
SDL88971.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.894
SDM04797.1
Cytochrome c.
   
 
  0.887
SDL43927.1
Hypothetical protein.
  
 0.832
SDM23777.1
FAD/FMN-containing dehydrogenase.
  
 
 0.757
Your Current Organism:
Chryseobacterium taihuense
NCBI taxonomy Id: 1141221
Other names: C. taihuense, CGMCC 1.10941, Chryseobacterium sp. THMBM1, Chryseobacterium taihuense Wu et al. 2013, NBRC 108747, strain THMBM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.