STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM19470.1Transposase. (80 aa)    
Predicted Functional Partners:
SDM19442.1
Putative ATP-dependent endonuclease of the OLD family.
       0.594
SDM19423.1
Hypothetical protein.
       0.586
SDM32762.1
Putative transposase.
  
    0.453
Your Current Organism:
Chryseobacterium taihuense
NCBI taxonomy Id: 1141221
Other names: C. taihuense, CGMCC 1.10941, Chryseobacterium sp. THMBM1, Chryseobacterium taihuense Wu et al. 2013, NBRC 108747, strain THMBM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.