STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001618405_00790Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_001618405_00789
Unannotated protein.
  
 
 0.998
GCA_001618405_05000
Unannotated protein.
 
 0.996
GCA_001618405_00769
Unannotated protein.
  
 0.995
GCA_001618405_03009
Unannotated protein.
 
 0.993
GCA_001618405_03869
Unannotated protein.
  
 0.989
GCA_001618405_02709
Unannotated protein.
   
  
 0.985
GCA_001618405_03175
Unannotated protein.
 
 0.963
GCA_001618405_02186
Unannotated protein.
 
 0.962
GCA_001618405_00295
Unannotated protein.
 
 0.959
GCA_001618405_04880
Unannotated protein.
 
 0.952
Your Current Organism:
Nocardia arizonensis
NCBI taxonomy Id: 1141647
Other names: CCUG 62754, DSM 45748, N. arizonensis, NBRC 108935, Nocardia arizonensis Lasker et al. 2017, Nocardia sp. W9405, Nocardia sp. W9409, Nocardia sp. W9575, strain W9405
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.