STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001618405_01894Unannotated protein. (522 aa)    
Predicted Functional Partners:
GCA_001618405_04180
Unannotated protein.
 0.874
GCA_001618405_04667
Unannotated protein.
 
  0.843
GCA_001618405_00325
Unannotated protein.
 
  0.796
GCA_001618405_04705
Unannotated protein.
 
 
 
 0.730
GCA_001618405_00360
Unannotated protein.
    
 0.664
GCA_001618405_00374
Unannotated protein.
    
   0.641
GCA_001618405_00564
Unannotated protein.
  
 
  0.614
GCA_001618405_06394
Unannotated protein.
   
 0.603
GCA_001618405_01893
Unannotated protein.
       0.592
GCA_001618405_03831
Unannotated protein.
  
 
 0.550
Your Current Organism:
Nocardia arizonensis
NCBI taxonomy Id: 1141647
Other names: CCUG 62754, DSM 45748, N. arizonensis, NBRC 108935, Nocardia arizonensis Lasker et al. 2017, Nocardia sp. W9405, Nocardia sp. W9409, Nocardia sp. W9575, strain W9405
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.