STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOA_00975Fimbrial biogenesis outer membrane usher protein; COG3188 P pilus assembly protein, porin PapC. (837 aa)    
Predicted Functional Partners:
OOA_00970
COG3121 P pilus assembly protein, chaperone PapD.
 
   0.955
OOA_18364
Putative exported fimbrial protein; COG3539 P pilus assembly protein, pilin FimA.
  
  0.879
OOA_11998
Fimbrial subunit; COG3539 P pilus assembly protein, pilin FimA.
  
  0.878
OOA_00195
COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
OOA_09086
COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
OOA_09091
Putative fimbrial chaperone; COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
OOA_09111
Putative fimbrial chaperone; COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
OOA_11933
COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
OOA_12018
COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
OOA_12570
COG3121 P pilus assembly protein, chaperone PapD.
  
   0.874
Your Current Organism:
Providencia burhodogranariea
NCBI taxonomy Id: 1141662
Other names: P. burhodogranariea DSM 19968, Providencia burhodogranariea DSM 19968, Providencia burhodogranariea str. B, Providencia burhodogranariea str. DSM 19968, Providencia burhodogranariea strain DSM 19968
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