STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOA_01190Hypothetical protein; COG1737 Transcriptional regulators. (278 aa)    
Predicted Functional Partners:
OOA_10472
COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
 
 0.884
OOA_01260
Hypothetical protein; COG0524 Sugar kinases, ribokinase family.
 
  
  0.814
OOA_01270
Hypothetical protein; COG3718 Uncharacterized enzyme involved in inositol metabolism.
 
   
 0.767
OOA_01265
Myo-inosose-2 dehydratase; COG1082 Sugar phosphate isomerases/epimerases.
 
     0.745
OOA_01200
Hypothetical protein; COG3962 Acetolactate synthase; Belongs to the TPP enzyme family.
 
   
 0.737
OOA_00080
PTS system trehalose(maltose)-specific transporter subunits IIBC; COG1264 Phosphotransferase system IIB components.
  
 
 0.736
OOA_09938
PTS system transporter subunit EIIBC; COG1264 Phosphotransferase system IIB components.
  
 
 0.736
OOA_12525
Bifunctional PTS system maltose and glucose-specific transporter subunits IICB; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
 
 0.736
murP
PTS system N-acetylmuramic acid transporter subunits IIBC; COG1264 Phosphotransferase system IIB components.
  
 
 0.736
OOA_14390
COG1737 Transcriptional regulators.
  
     0.676
Your Current Organism:
Providencia burhodogranariea
NCBI taxonomy Id: 1141662
Other names: P. burhodogranariea DSM 19968, Providencia burhodogranariea DSM 19968, Providencia burhodogranariea str. B, Providencia burhodogranariea str. DSM 19968, Providencia burhodogranariea strain DSM 19968
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