STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001941825_01261Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_001941825_03938
Unannotated protein.
  
     0.679
GCA_001941825_03198
Unannotated protein.
  
     0.578
GCA_001941825_01260
Unannotated protein.
       0.558
GCA_001941825_01162
Unannotated protein.
  
     0.556
GCA_001941825_06135
Unannotated protein.
  
     0.550
GCA_001941825_03733
Unannotated protein.
  
     0.508
GCA_001941825_00400
Unannotated protein.
  
     0.481
GCA_001941825_01959
Unannotated protein.
  
     0.469
GCA_001941825_06609
Unannotated protein.
  
     0.466
GCA_001941825_02802
Unannotated protein.
  
     0.440
Your Current Organism:
Massilia putida
NCBI taxonomy Id: 1141883
Other names: DSM 27523, KCTC 42761, M. putida, Massilia putida Feng et al. 2016, Massilia sp. 6NM-7, strain 6NM-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.