STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001941825_04971Unannotated protein. (89 aa)    
Predicted Functional Partners:
GCA_001941825_04972
Unannotated protein.
 
  
 0.997
GCA_001941825_00342
Unannotated protein.
 
  
 0.975
GCA_001941825_00343
Unannotated protein.
 
  
 0.929
GCA_001941825_00344
Unannotated protein.
 
  
 0.908
GCA_001941825_06176
Unannotated protein.
   
    0.892
GCA_001941825_05109
Unannotated protein.
   
    0.797
GCA_001941825_05246
Unannotated protein.
   
    0.797
GCA_001941825_01699
Unannotated protein.
   
    0.672
GCA_001941825_03457
Unannotated protein.
   
    0.672
GCA_001941825_03477
Unannotated protein.
   
    0.672
Your Current Organism:
Massilia putida
NCBI taxonomy Id: 1141883
Other names: DSM 27523, KCTC 42761, M. putida, Massilia putida Feng et al. 2016, Massilia sp. 6NM-7, strain 6NM-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.