STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM02421.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
BAM02420.1
Beta-agarase.
       0.642
BAM02419.1
Hypothetical protein.
       0.609
BAM02418.1
Hypothetical protein.
       0.589
BAM02417.1
Putative glycosyltransferase.
       0.581
BAM02422.1
Putative glycosyltransferase.
       0.510
BAM02423.1
Hypothetical protein.
       0.510
BAM02424.1
Putative glycosyltransferase.
       0.510
BAM02426.1
Putative polysaccharide biosynthesis protein.
 
    0.480
hisS
histidyl-tRNA synthetase; Protein synonym:histidine--tRNA ligase.
  
    0.435
BAM02429.1
Putative polysaccharide biosynthesis protein.
 
    0.426
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.