STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM02534.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
crtB
Phytoene synthase.
 
  
 0.867
BAM04135.1
Putative phytoene synthase.
 
  
 0.833
BAM02932.1
Hypothetical protein.
   
 0.808
BAM02931.1
Putative glycosyltransferase.
  
     0.767
BAM02730.1
Putative glycosyltransferase.
 
     0.626
crtI-2
Protein synonym:phytoene desaturase.
 
    
0.530
BAM02532.1
Hypothetical protein.
 
    
0.517
BAM02536.1
Hypothetical protein.
       0.513
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.