STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM02728.1Putative acetyltransferase. (318 aa)    
Predicted Functional Partners:
BAM03429.1
Hypothetical protein.
 
     0.549
BAM02729.1
Hypothetical protein.
       0.528
BAM03436.1
Hypothetical protein.
  
    0.511
BAM04570.1
Putative acyl carrier protein.
  
   
 0.493
flgB
Putative flagellar basal-body rod protein FlgB.
  
     0.481
BAM05034.1
Hypothetical protein.
  
     0.463
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.461
BAM02695.1
Hypothetical protein.
  
     0.456
flgL
Putative flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.455
BAM04417.1
Putative two-component system response regulator.
  
     0.455
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.