STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM03069.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
araB
L-ribulokinase.
  
  
  0.914
araD
L-ribulose-5-phosphate 4-epimerase.
  
 
  0.905
BAM03068.1
Putative oxidoreductase.
 
    0.880
BAM03452.1
Hypothetical protein.
  
    0.773
BAM03470.1
Hypothetical protein.
  
     0.711
BAM03093.1
Hypothetical protein.
  
     0.649
BAM03070.1
Hypothetical protein.
       0.615
BAM03085.1
Hypothetical protein.
  
     0.577
BAM03747.1
Hypothetical protein.
  
     0.532
BAM03438.1
Putative oxidoreductase.
  
    0.529
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.