STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM03143.1Putative ABC transporter permease protein. (271 aa)    
Predicted Functional Partners:
BAM03144.1
Putative ABC transporter ATP-binding protein.
 
  
 0.964
BAM03142.1
Putative ABC transporter permease protein.
 
  
 0.926
BAM03145.1
Hypothetical protein.
       0.557
BAM03146.1
Hypothetical protein.
       0.557
BAM05326.1
Hypothetical protein.
  
     0.506
BAM03168.1
Major facilitator superfamily protein.
  
     0.470
BAM03047.1
Hypothetical membrane protein.
  
     0.421
BAM04102.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.