STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM03647.1Putative efflux system outer membrane protein. (546 aa)    
Predicted Functional Partners:
BAM03649.1
Putative efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.930
BAM03987.1
Putative efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.922
BAM03648.1
Putative efflux system inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.853
BAM05109.1
Putative efflux system periplasmic linker protein.
  
 
 0.643
BAM05229.1
Putative efflux system periplasmic linker protein.
  
 
 0.643
BAM03646.1
Putative aldo/keto reductase.
       0.613
BAM03650.1
Efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.484
BAM04393.1
Hypothetical protein.
  
     0.418
BAM02571.1
Putative glycosyltransferase.
  
     0.417
BAM03651.1
Efflux system inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.405
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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