STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiXPutative sirohydrochlorin cobaltochelatase. (178 aa)    
Predicted Functional Partners:
BAM03278.1
Putative precorrin-2 dehydrogenase.
  
 
 0.980
cysGA/hemD
uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Bifunctional protein.
 
  
 0.859
BAM03817.1
Putative response regulator receiver protein.
       0.568
cysI
Putative NADPH--sulfite reductase hemoprotein beta-component.
 
  
 0.561
BAM03819.1
Putative oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.524
fdhD
FdhD protein homolog; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.521
cysH
Phosphoadenosine phosphosulfate reductase; Protein synonym:3'-phosphoadenylylsulfate reductase; protein synonym:thioredoxin dependent PAPS reductase; Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.490
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.462
cysNC
Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.431
BAM04200.1
Putative sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.418
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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