STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM04196.1Putative nitrate ABC transporter ATP-binding protein. (313 aa)    
Predicted Functional Partners:
BAM04199.1
Putative nitrate ABC transporter substrate binding protein.
 
 0.998
BAM04198.1
Putative nitrate ABC transporter permease protein.
 
 
 0.994
BAM04192.1
Putative nitrate binding protein.
  
 0.960
BAM04194.1
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.950
BAM04197.1
Putative nitrate ABC transporter ATP-binding protein.
 
  
 
0.949
BAM03489.1
ABC transporter permease protein.
  
 0.920
BAM03488.1
ABC transporter substrate binding protein.
 
  
 0.707
BAM04195.1
Hypothetical protein.
 
     0.672
BAM04073.1
Putative molybdenum ABC transporter permease protein.
    
 0.606
BAM04193.1
Putative response regulator.
 
   
 0.573
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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