STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM04589.1Putative ABC transporter substrate binding protein. (529 aa)    
Predicted Functional Partners:
BAM03990.1
Putative ABC transporter permease protein.
 
  
 0.934
BAM04631.1
Putative iron ABC transporter permease protein.
 
  
 0.755
BAM04452.1
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.741
BAM03084.1
Major facilitator superfamily protein.
  
  
 0.626
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.563
BAM04912.1
Hypothetical protein.
  
     0.536
BAM03632.1
Hypothetical membrane protein.
  
     0.508
BAM04630.1
Putative iron ABC transporter ATP-binding protein.
 
  
 0.489
BAM03761.1
Hypothetical protein.
  
     0.478
BAM04591.1
Hypothetical protein.
       0.437
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.