STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
urtAPutative urea ABC transporter substrate -binding protein. (423 aa)    
Predicted Functional Partners:
BAM03380.1
Putative urea ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
urtB
Putative urea ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
urtC
Putative urea ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
urtE
Putative urea ABC transporter ATP-binding protein.
 
 
 0.988
urtD
Putative urea ABC transporter ATP-binding protein.
 
  
 0.985
BAM03382.1
Putative urea ABC transporter ATP-binding protein.
 
 
 0.967
BAM03381.1
Putative urea ABC transporter ATP-binding protein.
 
  
 0.955
BAM03379.1
Putative urea ABC transporter substrate binding protein.
  
  
 
0.912
BAM03906.1
Putative NtrC family two-component system response regulator.
    
 0.867
BAM04934.1
Putative regulatory protein.
 
     0.845
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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