STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM05048.1Hypothetical protein. (337 aa)    
Predicted Functional Partners:
BAM05047.1
Hypothetical protein.
 
  
 0.878
BAM03364.1
Hypothetical protein.
 
    0.727
BAM05049.1
Putative transposase for insertion sequence element.
       0.718
BAM02283.1
Hypothetical protein.
 
  
 0.714
BAM02694.1
Hypothetical protein.
 
     0.707
BAM05050.1
Putative transposase for insertion sequence element.
       0.680
BAM03370.1
Hypothetical protein.
 
  
 0.640
BAM02407.1
Hypothetical protein.
 
  
 0.633
BAM02298.1
Hypothetical protein.
 
  
 0.591
BAM03367.1
Hypothetical protein.
 
  
 0.568
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.