STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM05124.1Hypothetical protein. (486 aa)    
Predicted Functional Partners:
BAM04453.1
Hypothetical protein.
 
    0.819
BAM05047.1
Hypothetical protein.
 
 
 0.705
BAM02196.1
Hypothetical protein.
  
 
 0.645
BAM02298.1
Hypothetical protein.
  
 
 0.645
BAM03367.1
Hypothetical protein.
  
 
 0.645
BAM05153.1
Hypothetical protein.
  
 
 0.645
BAM05126.1
Putative glycosyltransferase.
  
    0.643
BAM05125.1
Hypothetical protein.
       0.636
BAM04745.1
Hypothetical protein.
  
 
 0.608
BAM04941.1
MarR family transcriptional regulator.
  
     0.587
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.