STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM05230.1Putative efflux system inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1078 aa)    
Predicted Functional Partners:
BAM05229.1
Putative efflux system periplasmic linker protein.
 
   
 0.884
BAM03649.1
Putative efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.767
BAM03987.1
Putative efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.690
BAM04414.1
Cation efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.596
BAM03650.1
Efflux system periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.526
secD/secF
Putative protein-export membrane protein SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
  
 0.446
BAM03666.1
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.424
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.