STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM05249.1DtxR family transcriptional regulator. (135 aa)    
Predicted Functional Partners:
BAM05250.1
Iron ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.684
BAM05251.1
Iron ABC transporter ATP-binding protein.
  
  
 0.682
BAM02868.1
Fur family transcriptional regulator; Belongs to the Fur family.
  
  
 0.676
BAM05252.1
Iron ABC transporter permease protein.
  
  
 0.540
BAM05253.1
Iron ABC transporter permease protein.
  
  
 0.540
BAM05248.1
Hypothetical protein.
       0.507
BAM02392.1
Hypothetical protein.
   
    0.456
BAM03835.1
Hypothetical protein.
   
    0.456
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.436
BAM04304.1
Putative transporter.
  
  
 0.428
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.