STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tvaIIAlpha amylase catalytic region. (528 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase.
 
 
 0.992
glgX
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 
0.989
glgX1
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 
0.988
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.955
AFE05776.1
Putative sugar phosphotransferase.
 
 0.953
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.949
pulA
Alpha-1,6-glucosidase; Belongs to the glycosyl hydrolase 13 family.
  
0.943
iam
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 
0.935
yicI
Alpha-glucosidase 2; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.930
treS1
Trehalose synthase.
 
  
 
0.926
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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